CIRCA: Circadian gene expression profiles.

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(Examples 1451371_at 1422470_at gnf1m00037_a_at or Arntl or kinase inhibitor )

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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001034962 RNAseq_NM_001034963 RNAseq_NM_001034964 RNAseq_NM_009166 RNAseq_NM_178362 Probeset 1436737_a_at Links Wikipedia HomoloGene Symbol Sorbs1 Unigene Mm.210815 RefSeq Protein NP_001030134 NP_001030135 NP_001030136 NP_033192 NP_848139 RefSeq DNA NM_001034962 NM_001034963 NM_001034964 NM_009166 NM_178362 Description sorbin and SH3 domain containing 1
	p-Value	q-Value	period	phase
JTK	3.97e-08	2.5e-06	24.0	7.75
Lomb Scargle	4.4e-05	0.00237374	23.118	14.58
DeLichtenberg	0.0445	0.578713	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001113248 RNAseq_NM_009188 Probeset 1455039_a_at Links Wikipedia HomoloGene Symbol Sin3b Unigene Mm.2137 RefSeq Protein NP_001106719 NP_033214 RefSeq DNA NM_001113248 NM_009188 Description transcriptional regulator, SIN3B (yeast)
	p-Value	q-Value	period	phase
JTK	3.97e-08	2.5e-06	24.0	12.5
Lomb Scargle	0.000186	0.00629316	23.946	18.09
DeLichtenberg	0.8619	1.0	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001098222 RNAseq_NM_198161 Probeset 1428512_at Links Wikipedia HomoloGene Symbol Bhlhb9 Unigene Mm.440847 RefSeq Protein NP_001091692 NP_937804 RefSeq DNA NM_001098222 NM_198161 Description basic helix-loop-helix domain containing, class B9
	p-Value	q-Value	period	phase
JTK	3.97e-08	2.5e-06	23.0	11.0
Lomb Scargle	0.000204	0.00672068	23.118	17.89
DeLichtenberg	0.0235	0.568452	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_010635 Probeset 1418600_at Links Wikipedia HomoloGene Symbol Klf1 Unigene Mm.4847 RefSeq Protein NP_034765 RefSeq DNA NM_010635 Description Kruppel-like factor 1 (erythroid)
	p-Value	q-Value	period	phase
JTK	3.97e-08	2.5e-06	22.0	11.0
Lomb Scargle	0.000199	0.00659449	22.345	17.67
DeLichtenberg	0.0473	0.58548	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_145823 Probeset 1428025_s_at Links Wikipedia HomoloGene Symbol Pitpnc1 Unigene Mm.397413 RefSeq Protein NP_665822 RefSeq DNA NM_145823 Description phosphatidylinositol transfer protein, cytoplasmic 1
	p-Value	q-Value	period	phase
JTK	3.97e-08	2.5e-06	23.0	11.0
Lomb Scargle	0.000144	0.00524176	22.345	17.87
DeLichtenberg	0.0293	0.568452	24.0	NA
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			Experiment Mouse Pituitary 48 hour Hughes 2009 (Affymetrix) Probeset 1425893_a_at Links Wikipedia HomoloGene Symbol Fhit Unigene Mm.441926 RefSeq Protein NP_034340 RefSeq DNA NM_010210 Description fragile histidine triad gene
	p-Value	q-Value	period	phase
JTK	2.05e-09	2.5e-06	24.0	12.25
Lomb Scargle	1.42e-05	0.017309	23.118	18.56
DeLichtenberg	0.3867	1.0	24.0	NA
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			Experiment Mouse Liver Panda 2002 (Affymetrix) Probeset 96890_at Links Wikipedia HomoloGene Symbol Lonp2 Unigene Mm.324550 RefSeq Protein NP_001162063 NP_080103 RefSeq DNA NM_001168591 NM_025827 Description lon peptidase 2, peroxisomal
	p-Value	q-Value	period	phase
JTK	2.54e-10	2.53e-06	24.0	6.0
Lomb Scargle	0.000721	1.0	26.563	12.2
DeLichtenberg	0.8825	1.0	24.0	NA
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			Experiment Mouse 1.OST Kidney (Affymetrix) UCSC RNAseq RNAseq_NM_010517 Probeset 10381096 Links Wikipedia HomoloGene Symbol Igfbp4 Unigene Mm.233799 RefSeq Protein None RefSeq DNA NM_010517 Description insulin-like growth factor binding protein 4
	p-Value	q-Value	period	phase
JTK	1.7763e-09	2.74601e-06	24.0	12.0
Lomb Scargle	0.000386	0.331718	23.892	10.61
DeLichtenberg	0.84	1.0	24.0	NA
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			Experiment Mouse 1.OST Kidney (Affymetrix) UCSC RNAseq RNAseq_NM_198937 Probeset 10448803 Links Wikipedia HomoloGene Symbol Hn1l Unigene Mm.371601 RefSeq Protein None RefSeq DNA NM_198937 Description hematological and neurological expressed 1-like
	p-Value	q-Value	period	phase
JTK	1.7763e-09	2.74601e-06	24.0	23.0
Lomb Scargle	0.000652	0.331718	23.064	22.39
DeLichtenberg	0.0676	0.67783	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001168475 RNAseq_NM_001168476 RNAseq_NM_001168477 RNAseq_NM_025905 Probeset 1448902_at Links Wikipedia HomoloGene Symbol Ttc23 Unigene Mm.249356 RefSeq Protein NP_001161947 NP_001161948 NP_001161949 NP_080181 RefSeq DNA NM_001168475 NM_001168476 NM_001168477 NM_025905 Description tetratricopeptide repeat domain 23
	p-Value	q-Value	period	phase
JTK	4.64e-08	2.86e-06	24.0	18.0
Lomb Scargle	6.58e-06	0.000729151	23.118	23.8
DeLichtenberg	0.0927	0.713619	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001045529 Probeset 1420091_s_at Links Wikipedia HomoloGene Symbol Morc3 Unigene Mm.287329 RefSeq Protein NP_001038994 RefSeq DNA NM_001045529 Description microrchidia 3
	p-Value	q-Value	period	phase
JTK	4.64e-08	2.86e-06	24.0	13.0
Lomb Scargle	1.22e-05	0.00106841	23.946	21.48
DeLichtenberg	0.0618	0.615059	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_028975 RNAseq_NM_030108 Probeset 1436028_at Links Wikipedia HomoloGene Symbol Tmem33 Unigene Mm.23217 RefSeq Protein NP_083251 NP_084384 RefSeq DNA NM_028975 NM_030108 Description transmembrane protein 33
	p-Value	q-Value	period	phase
JTK	4.64e-08	2.86e-06	26.0	18.0
Lomb Scargle	1.92e-05	0.00138772	25.306	0.69
DeLichtenberg	0.0949	0.7191	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001130184 RNAseq_NM_001130185 RNAseq_NM_001130186 RNAseq_NM_172303 Probeset 1452180_at Links Wikipedia HomoloGene Symbol Phf17 Unigene Mm.286285 RefSeq Protein NP_001123656 NP_001123657 NP_001123658 NP_758507 RefSeq DNA NM_001130184 NM_001130185 NM_001130186 NM_172303 Description PHD finger protein 17
	p-Value	q-Value	period	phase
JTK	4.64e-08	2.86e-06	25.0	7.0
Lomb Scargle	5.01e-05	0.00259421	23.118	14.46
DeLichtenberg	0.0255	0.568452	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_007393 Probeset AFFX-b-ActinMur/M12481_3_at Links Wikipedia HomoloGene Symbol Actb Unigene Mm.391967 RefSeq Protein NP_031419 RefSeq DNA NM_007393 Description actin, beta
	p-Value	q-Value	period	phase
JTK	4.64e-08	2.86e-06	26.5	23.25
Lomb Scargle	1.81e-05	0.00134044	26.302	6.72
DeLichtenberg	0.114	0.783767	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001039147 RNAseq_NM_024431 RNAseq_XM_893769 Probeset 1455077_a_at Links Wikipedia HomoloGene Symbol A730098P11Rik Morf4l1 Unigene Mm.479140 RefSeq Protein NP_001034236 NP_077751 XP_898862 RefSeq DNA NM_001039147 NM_024431 XM_893769 Description RIKEN cDNA A730098P11 gene /// mortality factor 4 like 1
	p-Value	q-Value	period	phase
JTK	4.64e-08	2.86e-06	27.0	6.0
Lomb Scargle	1.34e-05	0.00111917	26.829	12.81
DeLichtenberg	0.8251	1.0	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001039088 RNAseq_NM_028112 Probeset 1424200_s_at Links Wikipedia HomoloGene Symbol Seh1l Unigene Mm.476803 RefSeq Protein NP_001034177 NP_082388 RefSeq DNA NM_001039088 NM_028112 Description SEH1-like (S. cerevisiae
	p-Value	q-Value	period	phase
JTK	4.64e-08	2.86e-06	26.0	5.0
Lomb Scargle	5.16e-05	0.00265967	25.306	12.26
DeLichtenberg	0.9849	1.0	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_007451 Probeset 1438546_x_at Links Wikipedia HomoloGene Symbol Slc25a5 Unigene Mm.371544 RefSeq Protein NP_031477 RefSeq DNA NM_007451 Description solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5
	p-Value	q-Value	period	phase
JTK	4.64e-08	2.86e-06	26.0	17.5
Lomb Scargle	5.47e-05	0.00276263	25.306	0.7
DeLichtenberg	0.9062	1.0	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_138950 Probeset 1460234_at Links Wikipedia HomoloGene Symbol Wdr81 Unigene Mm.340378 RefSeq Protein NP_620400 RefSeq DNA NM_138950 Description WD repeat domain 81
	p-Value	q-Value	period	phase
JTK	4.64e-08	2.86e-06	25.0	3.0
Lomb Scargle	0.000102	0.00419736	24.836	10.35
DeLichtenberg	0.0149	0.568452	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_XR_104591 RNAseq_XR_107325 Probeset 1437549_at Links Wikipedia HomoloGene Symbol 2810408I11Rik Unigene None RefSeq Protein None RefSeq DNA XR_104591 XR_107325 Description RIKEN cDNA 2810408I11 gene
	p-Value	q-Value	period	phase
JTK	4.64e-08	2.86e-06	25.0	17.0
Lomb Scargle	0.000144	0.00524176	24.383	23.74
DeLichtenberg	0.0265	0.568452	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001163729 RNAseq_NM_027910 Probeset 1454747_a_at Links Wikipedia HomoloGene Symbol Klhdc3 Unigene Mm.254784 RefSeq Protein NP_001157201 NP_082186 RefSeq DNA NM_001163729 NM_027910 Description kelch domain containing 3
	p-Value	q-Value	period	phase
JTK	4.64e-08	2.86e-06	22.0	8.5
Lomb Scargle	5.04e-05	0.00260377	22.345	14.74
DeLichtenberg	0.2877	1.0	24.0	NA
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