CIRCA: Circadian gene expression profiles.

Enter a search
(Examples 1451371_at 1422470_at gnf1m00037_a_at or Arntl or kinase inhibitor )

Query syntax mode: by gene symbol simple advanced

Choose probability filter
Probabily cut-off value ("0.5" or "2e-10")
JTK phase range ("0-6" or "10.30-11.10")

Output mode normal slim
Number of entries to download ("50" or "100", max: "1000")

Select one or more experiments to view

(If nothing is selected, CIRCA will search all experiments.)

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_028312 Probeset 1419803_s_at Links Wikipedia HomoloGene Symbol Ccdc12 Unigene Mm.249115 RefSeq Protein NP_082588 RefSeq DNA NM_028312 Description coiled-coil domain containing 12
	p-Value	q-Value	period	phase
JTK	1.8e-08	1.27e-06	25.0	3.0
Lomb Scargle	3.54e-05	0.00204427	24.836	10.65
DeLichtenberg	0.3374	1.0	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001039185 RNAseq_NM_001039186 RNAseq_NM_001039187 RNAseq_NM_001113368 RNAseq_NM_001113369 RNAseq_NM_007543 RNAseq_NM_011926 Probeset 1460682_s_at Links Wikipedia HomoloGene Symbol Ceacam1 Ceacam2 Unigene Mm.322502 RefSeq Protein NP_001034274 NP_001034275 NP_001034276 NP_001106839 NP_001106840 NP_031569 NP_036056 RefSeq DNA NM_001039185 NM_001039186 NM_001039187 NM_001113368 NM_001113369 NM_007543 NM_011926 Description carcinoembryonic antigen-related cell adhesion molecule 1 /// carcinoembryonic antigen-related cell adhesion molecule 2
	p-Value	q-Value	period	phase
JTK	1.8e-08	1.27e-06	24.0	4.0
Lomb Scargle	6.08e-05	0.00294537	23.946	10.83
DeLichtenberg	0.078	0.672634	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_011076 Probeset 1419759_at Links Wikipedia HomoloGene Symbol Abcb1a Unigene Mm.207354 RefSeq Protein NP_035206 RefSeq DNA NM_011076 Description ATP-binding cassette, sub-family B (MDR/TAP), member 1A
	p-Value	q-Value	period	phase
JTK	1.8e-08	1.27e-06	23.0	13.0
Lomb Scargle	8.17e-05	0.0036249	22.725	18.6
DeLichtenberg	0.0411	0.578713	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_199306 Probeset 1434560_at Links Wikipedia HomoloGene Symbol Wdtc1 Unigene Mm.226576 RefSeq Protein NP_955010 RefSeq DNA NM_199306 Description WD and tetratricopeptide repeats 1
	p-Value	q-Value	period	phase
JTK	1.8e-08	1.27e-06	22.0	7.5
Lomb Scargle	8.68e-05	0.00377509	22.725	14.04
DeLichtenberg	0.0541	0.593896	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_009999 Probeset 1425645_s_at Links Wikipedia HomoloGene Symbol Cyp2b10 Unigene Mm.218749 RefSeq Protein NP_034129 RefSeq DNA NM_009999 Description cytochrome P450, family 2, subfamily b, polypeptide 10
	p-Value	q-Value	period	phase
JTK	1.8e-08	1.27e-06	25.0	19.5
Lomb Scargle	0.000105	0.00427401	25.306	3.95
DeLichtenberg	0.0086	0.568452	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_009836 Probeset 1449645_s_at Links Wikipedia HomoloGene Symbol Cct3 Unigene Mm.256034 RefSeq Protein NP_033966 RefSeq DNA NM_009836 Description chaperonin containing Tcp1, subunit 3 (gamma)
	p-Value	q-Value	period	phase
JTK	1.8e-08	1.27e-06	26.5	18.5
Lomb Scargle	2.51e-05	0.00164779	26.829	4.39
DeLichtenberg	0.0733	0.653341	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_028790 Probeset 1449457_at Links Wikipedia HomoloGene Symbol Acot12 Unigene Mm.275963 RefSeq Protein NP_083066 RefSeq DNA NM_028790 Description acyl-CoA thioesterase 12
	p-Value	q-Value	period	phase
JTK	1.8e-08	1.27e-06	21.0	11.5
Lomb Scargle	2.58e-05	0.00167185	20.945	18.11
DeLichtenberg	0.2834	1.0	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_021384 Probeset 1436058_at Links Wikipedia HomoloGene Symbol Rsad2 Unigene Mm.24045 RefSeq Protein NP_067359 RefSeq DNA NM_021384 Description radical S-adenosyl methionine domain containing 2
	p-Value	q-Value	period	phase
JTK	1.8e-08	1.27e-06	25.0	2.0
Lomb Scargle	0.00345	0.0500317	23.946	8.26
DeLichtenberg	0.0385	0.568452	24.0	NA
back to the top

			Experiment Mouse 1.OST Liver (Affymetrix) UCSC RNAseq RNAseq_NM_175687 RNAseq_NM_145154 Probeset 10583485 Links Wikipedia HomoloGene Symbol A230050P20Rik Unigene Mm.249932 RefSeq Protein None RefSeq DNA NM_175687 NM_145154 Description RIKEN cDNA A230050P20 gene
	p-Value	q-Value	period	phase
JTK	9.4304e-10	1.28964e-06	24.0	22.0
Lomb Scargle	0.000488	0.173327	23.064	21.9
DeLichtenberg	0.0051	0.127701	24.0	NA
back to the top

			Experiment Mouse 1.OST Liver (Affymetrix) UCSC RNAseq RNAseq_NM_009450 Probeset 10408610 Links Wikipedia HomoloGene Symbol Tubb2a Unigene Mm.469917 RefSeq Protein None RefSeq DNA NM_009450 Description tubulin, beta 2A
	p-Value	q-Value	period	phase
JTK	9.4304e-10	1.28964e-06	22.0	0.0
Lomb Scargle	0.000403	0.173327	22.291	21.92
DeLichtenberg	0.046	0.536606	24.0	NA
back to the top

			Experiment Mouse 1.OST Liver (Affymetrix) UCSC RNAseq RNAseq_NM_007489 Probeset 10556463 Links Wikipedia HomoloGene Symbol Arntl Unigene Mm.440371 RefSeq Protein None RefSeq DNA NM_007489 Description aryl hydrocarbon receptor nuclear translocator-like
	p-Value	q-Value	period	phase
JTK	9.4304e-10	1.28964e-06	24.0	22.0
Lomb Scargle	0.000397	0.173327	23.064	21.96
DeLichtenberg	0.469	1.0	24.0	NA
back to the top

			Experiment Mouse 1.OST Liver (Affymetrix) UCSC RNAseq RNAseq_NM_021524 Probeset 10395259 Links Wikipedia HomoloGene Symbol Nampt Unigene Mm.202727 RefSeq Protein None RefSeq DNA NM_021524 Description nicotinamide phosphoribosyltransferase
	p-Value	q-Value	period	phase
JTK	9.4304e-10	1.28964e-06	24.0	14.0
Lomb Scargle	0.000587	0.173327	23.892	15.24
DeLichtenberg	0.4106	1.0	24.0	NA
back to the top

			Experiment Mouse 1.OST Liver (Affymetrix) UCSC RNAseq RNAseq_NM_001114386 RNAseq_NM_031881 Probeset 10456254 Links Wikipedia HomoloGene Symbol Nedd4l Unigene Mm.98668 RefSeq Protein None RefSeq DNA NM_001114386 NM_031881 Description neural precursor cell expressed, developmentally down-regulated gene 4-like
	p-Value	q-Value	period	phase
JTK	9.4304e-10	1.28964e-06	24.0	21.0
Lomb Scargle	0.000608	0.173327	23.064	21.83
DeLichtenberg	0.1233	1.0	24.0	NA
back to the top

			Experiment Mouse 1.OST Liver (Affymetrix) UCSC RNAseq RNAseq_NM_146042 RNAseq_NM_001170643 Probeset 10404965 Links Wikipedia HomoloGene Symbol Rnf144b Unigene Mm.287609 RefSeq Protein None RefSeq DNA NM_146042 NM_001170643 Description ring finger protein 144B
	p-Value	q-Value	period	phase
JTK	9.4304e-10	1.28964e-06	24.0	22.0
Lomb Scargle	0.000654	0.173327	23.064	21.88
DeLichtenberg	0.0241	0.362019	24.0	NA
back to the top

			Experiment Mouse Wild Type Muscle (GNF microarray) Probeset gnf1m17166_a_at Links Wikipedia HomoloGene Symbol Col4a1 Unigene Mm.738 RefSeq Protein None RefSeq DNA NM_009931 Description procollagen, type IV, alpha 1
	p-Value	q-Value	period	phase
JTK	0.00525014	1.31e-06	24.0	4.0
Lomb Scargle	0.00205	1.0	24.407	8.82
DeLichtenberg	0.0045	0.211752	24.0	NA
back to the top

			Experiment Mouse Pituitary 48 hour Hughes 2009 (Affymetrix) Probeset 1426236_a_at Links Wikipedia HomoloGene Symbol Glul Unigene Mm.210745 RefSeq Protein NP_032157 RefSeq DNA NM_008131 Description glutamate-ammonia ligase (glutamine synthetase)
	p-Value	q-Value	period	phase
JTK	1.02e-09	1.35e-06	24.0	13.0
Lomb Scargle	2.05e-05	0.0215016	23.525	18.6
DeLichtenberg	0.8054	1.0	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_172372 Probeset 1424786_s_at Links Wikipedia HomoloGene Symbol Wdr45 Unigene Mm.305725 RefSeq Protein NP_758960 RefSeq DNA NM_172372 Description WD repeat domain 45
	p-Value	q-Value	period	phase
JTK	2.11e-08	1.45e-06	23.0	10.0
Lomb Scargle	1.47e-06	0.000302733	23.118	16.73
DeLichtenberg	0.4602	1.0	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_021525 Probeset 1416730_at Links Wikipedia HomoloGene Symbol Rcl1 Unigene Mm.28630 RefSeq Protein NP_067500 RefSeq DNA NM_021525 Description RNA terminal phosphate cyclase-like 1
	p-Value	q-Value	period	phase
JTK	2.11e-08	1.45e-06	24.0	7.5
Lomb Scargle	1.47e-06	0.000302733	22.725	15.57
DeLichtenberg	0.0726	0.65122	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_026180 Probeset 1420656_at Links Wikipedia HomoloGene Symbol Abcg8 Unigene Mm.26581 RefSeq Protein NP_080456 RefSeq DNA NM_026180 Description ATP-binding cassette, sub-family G (WHITE), member 8
	p-Value	q-Value	period	phase
JTK	2.11e-08	1.45e-06	23.0	8.0
Lomb Scargle	3.5e-06	0.000515024	22.345	14.77
DeLichtenberg	0.007	0.568452	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001005341 Probeset 1434277_a_at Links Wikipedia HomoloGene Symbol Ypel2 Unigene Mm.191894 RefSeq Protein NP_001005341 RefSeq DNA NM_001005341 Description yippee-like 2 (Drosophila)
	p-Value	q-Value	period	phase
JTK	2.11e-08	1.45e-06	25.0	22.5
Lomb Scargle	1.4e-05	0.00115012	23.946	6.13
DeLichtenberg	0.0058	0.568452	24.0	NA
back to the top