CIRCA: Circadian gene expression profiles.

Enter a search
(Examples 1451371_at 1422470_at gnf1m00037_a_at or Arntl or kinase inhibitor )

Query syntax mode: by gene symbol simple advanced

Choose probability filter
Probabily cut-off value ("0.5" or "2e-10")
JTK phase range ("0-6" or "10.30-11.10")

Output mode normal slim
Number of entries to download ("50" or "100", max: "1000")

Select one or more experiments to view

(If nothing is selected, CIRCA will search all experiments.)

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001170430 RNAseq_NM_001170431 RNAseq_NM_134060 Probeset 1448937_at Links Wikipedia HomoloGene Symbol Slc35b3 Unigene Mm.255506 RefSeq Protein NP_001163901 NP_001163902 NP_598821 RefSeq DNA NM_001170430 NM_001170431 NM_134060 Description solute carrier family 35, member B3
	p-Value	q-Value	period	phase
JTK	1.1e-08	8.32e-07	25.0	4.5
Lomb Scargle	4.35e-05	0.00235521	25.306	11.77
DeLichtenberg	0.7296	1.0	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_030021 Probeset 1425746_at Links Wikipedia HomoloGene Symbol D730039F16Rik Unigene Mm.215255 RefSeq Protein NP_084297 RefSeq DNA NM_030021 Description RIKEN cDNA D730039F16 gene
	p-Value	q-Value	period	phase
JTK	1.1e-08	8.32e-07	28.0	19.5
Lomb Scargle	8.09e-06	0.0008277	27.379	6.01
DeLichtenberg	0.0492	0.58548	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_148926 Probeset 1441948_x_at Links Wikipedia HomoloGene Symbol Zfand3 Unigene Mm.220972 RefSeq Protein NP_683728 RefSeq DNA NM_148926 Description zinc finger, AN1-type domain 3
	p-Value	q-Value	period	phase
JTK	1.1e-08	8.32e-07	21.0	9.5
Lomb Scargle	9.13e-06	0.00087803	21.279	16.51
DeLichtenberg	0.2764	1.0	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_028077 Probeset 1425921_a_at Links Wikipedia HomoloGene Symbol 1810055G02Rik Unigene Mm.23780 RefSeq Protein NP_082353 RefSeq DNA NM_028077 Description RIKEN cDNA 1810055G02 gene
	p-Value	q-Value	period	phase
JTK	1.1e-08	8.32e-07	22.0	12.0
Lomb Scargle	5.69e-05	0.00281079	21.978	18.15
DeLichtenberg	0.0095	0.568452	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_008898 Probeset 1416933_at Links Wikipedia HomoloGene Symbol Por Unigene Mm.3863 RefSeq Protein NP_032924 RefSeq DNA NM_008898 Description P450 (cytochrome) oxidoreductase
	p-Value	q-Value	period	phase
JTK	1.1e-08	8.32e-07	22.0	13.0
Lomb Scargle	2.78e-05	0.00173658	21.279	18.67
DeLichtenberg	0.0109	0.568452	24.0	NA
back to the top

			Experiment Mouse Wild Type Muscle (GNF microarray) Probeset gnf1m10493_a_at Links Wikipedia HomoloGene Symbol Slc38a2 Unigene None RefSeq Protein None RefSeq DNA NM_175121 Description solute carrier family 38, member 2
	p-Value	q-Value	period	phase
JTK	0.00386015	8.53e-07	24.0	20.0
Lomb Scargle	0.00167	1.0	23.668	1.66
DeLichtenberg	0.0023	0.175197	24.0	NA
back to the top

			Experiment Mouse 1.OST Liver (Affymetrix) UCSC RNAseq RNAseq_NM_013769 Probeset 10371111 Links Wikipedia HomoloGene Symbol Tjp3 Unigene Mm.27984 RefSeq Protein None RefSeq DNA NM_013769 Description tight junction protein 3
	p-Value	q-Value	period	phase
JTK	4.89762e-10	8.70699e-07	24.0	22.0
Lomb Scargle	0.000595	0.173327	23.064	21.92
DeLichtenberg	0.7678	1.0	24.0	NA
back to the top

			Experiment Mouse 1.OST Liver (Affymetrix) UCSC RNAseq RNAseq_NM_001005423 Probeset 10355456 Links Wikipedia HomoloGene Symbol Mreg Unigene Mm.422636 RefSeq Protein None RefSeq DNA NM_001005423 Description melanoregulin
	p-Value	q-Value	period	phase
JTK	4.89762e-10	8.70699e-07	24.0	0.0
Lomb Scargle	0.000447	0.173327	23.892	22.71
DeLichtenberg	0.1041	0.917546	24.0	NA
back to the top

			Experiment Mouse 1.OST Liver (Affymetrix) UCSC RNAseq RNAseq_NM_028451 Probeset 10376292 Links Wikipedia HomoloGene Symbol Larp1 Unigene Mm.248843 RefSeq Protein None RefSeq DNA NM_028451 Description La ribonucleoprotein domain family, member 1
	p-Value	q-Value	period	phase
JTK	4.89762e-10	8.70699e-07	24.0	23.0
Lomb Scargle	0.000514	0.173327	23.064	22.09
DeLichtenberg	0.9393	1.0	24.0	NA
back to the top

			Experiment Mouse 1.OST Liver (Affymetrix) UCSC RNAseq RNAseq_NM_027985 Probeset 10510286 Links Wikipedia HomoloGene Symbol Mad2l2 Unigene Mm.9648 RefSeq Protein None RefSeq DNA NM_027985 Description MAD2 mitotic arrest deficient-like 2 (yeast)
	p-Value	q-Value	period	phase
JTK	4.89762e-10	8.70699e-07	24.0	0.0
Lomb Scargle	0.000423	0.173327	23.064	22.38
DeLichtenberg	0.8294	1.0	24.0	NA
back to the top

			Experiment Mouse 1.OST Liver (Affymetrix) UCSC RNAseq RNAseq_NM_001037842 RNAseq_NM_053097 Probeset 10545865 Links Wikipedia HomoloGene Symbol Cml3 Unigene Mm.479603 RefSeq Protein None RefSeq DNA NM_001037842 NM_053097 Description camello-like 3
	p-Value	q-Value	period	phase
JTK	4.89762e-10	8.70699e-07	24.0	17.0
Lomb Scargle	0.0016	0.173327	23.892	16.48
DeLichtenberg	0.1272	1.0	24.0	NA
back to the top

			Experiment Mouse 1.OST Liver (Affymetrix) UCSC RNAseq RNAseq_NM_001110271 RNAseq_NM_145919 RNAseq_NM_001110272 Probeset 10596481 Links Wikipedia HomoloGene Symbol Abhd14a Unigene Mm.268925 RefSeq Protein None RefSeq DNA NM_001110271 NM_145919 NM_001110272 Description abhydrolase domain containing 14A
	p-Value	q-Value	period	phase
JTK	4.89762e-10	8.70699e-07	24.0	22.0
Lomb Scargle	0.000951	0.173327	23.064	21.86
DeLichtenberg	0.9084	1.0	24.0	NA
back to the top

			Experiment Mouse 1.OST Liver (Affymetrix) UCSC RNAseq RNAseq_NM_001037842 RNAseq_NM_053097 Probeset 10545862 Links Wikipedia HomoloGene Symbol Cml3 Unigene Mm.479603 RefSeq Protein None RefSeq DNA NM_001037842 NM_053097 Description camello-like 3
	p-Value	q-Value	period	phase
JTK	4.89762e-10	8.70699e-07	24.0	17.0
Lomb Scargle	0.00197	0.173327	23.892	16.51
DeLichtenberg	0.1719	1.0	24.0	NA
back to the top

			Experiment Mouse 1.OST Liver (Affymetrix) UCSC RNAseq RNAseq_NM_025449 Probeset 10588876 Links Wikipedia HomoloGene Symbol Nicn1 Unigene Mm.10407 RefSeq Protein None RefSeq DNA NM_025449 Description nicolin 1
	p-Value	q-Value	period	phase
JTK	4.89762e-10	8.70699e-07	24.0	23.0
Lomb Scargle	0.00085	0.173327	23.892	22.26
DeLichtenberg	0.1205	1.0	24.0	NA
back to the top

			Experiment Mouse 1.OST Aorta (Affymetrix) UCSC RNAseq RNAseq_NM_153484 RNAseq_NM_017376 Probeset 10425601 Links Wikipedia HomoloGene Symbol Tef Unigene Mm.270278 RefSeq Protein None RefSeq DNA NM_153484 NM_017376 Description thyrotroph embryonic factor
	p-Value	q-Value	period	phase
JTK	1.22923e-10	8.74131e-07	24.0	12.0
Lomb Scargle	0.000364	1.0	23.064	10.59
DeLichtenberg	0.681	1.0	24.0	NA
back to the top

			Experiment Mouse 1.OST Heart (Affymetrix) UCSC RNAseq RNAseq_NM_001081347 Probeset 10363773 Links Wikipedia HomoloGene Symbol Rhobtb1 Unigene Mm.26659 RefSeq Protein None RefSeq DNA NM_001081347 Description Rho-related BTB domain containing 1
	p-Value	q-Value	period	phase
JTK	1.22923e-10	8.74131e-07	24.0	13.0
Lomb Scargle	0.000545	0.630717	23.064	13.45
DeLichtenberg	0.0277	0.391144	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001037757 RNAseq_NM_026833 Probeset 1424597_at Links Wikipedia HomoloGene Symbol ORF19 Unigene Mm.296545 RefSeq Protein NP_001032846 NP_081109 RefSeq DNA NM_001037757 NM_026833 Description open reading frame 19
	p-Value	q-Value	period	phase
JTK	1.2e-08	9.03e-07	24.0	4.75
Lomb Scargle	0.000272	0.0082332	23.946	12.21
DeLichtenberg	0.0982	0.72916	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_026696 Probeset 1453243_at Links Wikipedia HomoloGene Symbol 0610030E20Rik Unigene Mm.52711 RefSeq Protein NP_080972 RefSeq DNA NM_026696 Description RIKEN cDNA 0610030E20 gene
	p-Value	q-Value	period	phase
JTK	1.2e-08	9.03e-07	26.0	2.0
Lomb Scargle	0.00239	0.0388018	24.836	10.79
DeLichtenberg	0.4326	1.0	24.0	NA
back to the top

			Experiment Mouse NIH 3T3 Immortilized Cell Line 48 hour Hughes 2009 (Affymetrix) Probeset 1434414_at Links Wikipedia HomoloGene Symbol Foxred2 Unigene Mm.295605 RefSeq Protein NP_001017983 NP_001161732 RefSeq DNA NM_001017983 NM_001168260 Description FAD-dependent oxidoreductase domain containing 2
	p-Value	q-Value	period	phase
JTK	1.64e-10	9.22e-07	42.0	17.5
Lomb Scargle	5.86e-06	0.0293658	42.0	19.8
DeLichtenberg	0.2848	1.0	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_008304 Probeset 1448545_at Links Wikipedia HomoloGene Symbol Sdc2 Unigene Mm.234266 RefSeq Protein NP_032330 RefSeq DNA NM_008304 Description syndecan 2
	p-Value	q-Value	period	phase
JTK	1.3e-08	9.62e-07	25.0	2.0
Lomb Scargle	4.41e-06	0.000578184	24.836	9.4
DeLichtenberg	0.6101	1.0	24.0	NA
back to the top