CIRCA: Circadian gene expression profiles.

Enter a search
(Examples 1451371_at 1422470_at gnf1m00037_a_at or Arntl or kinase inhibitor )

Query syntax mode: by gene symbol simple advanced

Choose probability filter
Probabily cut-off value ("0.5" or "2e-10")
JTK phase range ("0-6" or "10.30-11.10")

Output mode normal slim
Number of entries to download ("50" or "100", max: "1000")

Select one or more experiments to view

(If nothing is selected, CIRCA will search all experiments.)

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_025415 Probeset 1417458_s_at Links Wikipedia HomoloGene Symbol Cks2 Unigene Mm.222228 RefSeq Protein NP_079691 RefSeq DNA NM_025415 Description CDC28 protein kinase regulatory subunit 2
	p-Value	q-Value	period	phase
JTK	9.36e-09	7.22e-07	26.0	20.5
Lomb Scargle	3.35e-05	0.00198019	24.383	6.02
DeLichtenberg	0.2001	1.0	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_011278 Probeset 1423654_a_at Links Wikipedia HomoloGene Symbol Rnf4 Unigene Mm.21281 RefSeq Protein NP_035408 RefSeq DNA NM_011278 Description ring finger protein 4
	p-Value	q-Value	period	phase
JTK	9.36e-09	7.22e-07	22.0	7.0
Lomb Scargle	1.65e-05	0.00127208	22.345	11.47
DeLichtenberg	0.8089	1.0	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001110850 RNAseq_NM_001110851 RNAseq_NM_001110852 RNAseq_NM_001110853 RNAseq_NM_001110854 RNAseq_NM_001110855 RNAseq_NM_001110856 RNAseq_NM_001110857 RNAseq_NM_001110858 RNAseq_NM_001110859 RNAseq_NM_013498 Probeset 1449037_at Links Wikipedia HomoloGene Symbol Crem Unigene Mm.5244 RefSeq Protein NP_001104320 NP_001104321 NP_001104322 NP_001104323 NP_001104324 NP_001104325 NP_001104326 NP_001104327 NP_001104328 NP_001104329 NP_038526 RefSeq DNA NM_001110850 NM_001110851 NM_001110852 NM_001110853 NM_001110854 NM_001110855 NM_001110856 NM_001110857 NM_001110858 NM_001110859 NM_013498 Description cAMP responsive element modulator
	p-Value	q-Value	period	phase
JTK	9.36e-09	7.22e-07	26.0	21.0
Lomb Scargle	4.9e-05	0.00255781	25.306	6.21
DeLichtenberg	0.1524	0.903918	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001025192 RNAseq_NM_009988 Probeset 1427321_s_at Links Wikipedia HomoloGene Symbol Cxadr Unigene Mm.66222 RefSeq Protein NP_001020363 NP_034118 RefSeq DNA NM_001025192 NM_009988 Description coxsackie virus and adenovirus receptor
	p-Value	q-Value	period	phase
JTK	9.36e-09	7.22e-07	26.5	18.5
Lomb Scargle	2.02e-05	0.00142573	26.302	5.31
DeLichtenberg	0.0352	0.568452	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_145923 Probeset 1452359_at Links Wikipedia HomoloGene Symbol Rell1 Unigene Mm.479580 RefSeq Protein NP_666035 RefSeq DNA NM_145923 Description RELT-like 1
	p-Value	q-Value	period	phase
JTK	9.36e-09	7.22e-07	26.0	3.5
Lomb Scargle	0.000256	0.0078973	24.383	12.02
DeLichtenberg	0.0322	0.568452	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_133974 Probeset 1427095_at Links Wikipedia HomoloGene Symbol Cdcp1 Unigene Mm.27519 RefSeq Protein NP_598735 RefSeq DNA NM_133974 Description CUB domain containing protein 1
	p-Value	q-Value	period	phase
JTK	9.36e-09	7.22e-07	23.0	23.0
Lomb Scargle	0.0011	0.0218359	23.525	5.87
DeLichtenberg	0.0221	0.568452	24.0	NA
back to the top

			Experiment Mouse NIH 3T3 Immortilized Cell Line 48 hour Hughes 2009 (Affymetrix) Probeset 1424175_at Links Wikipedia HomoloGene Symbol Tef Unigene Mm.270278 RefSeq Protein NP_059072 NP_705617 RefSeq DNA NM_017376 NM_153484 Description thyrotroph embryonic factor
	p-Value	q-Value	period	phase
JTK	1.12e-10	7.22e-07	25.0	0.5
Lomb Scargle	3.38e-06	0.0254069	23.118	6.13
DeLichtenberg	0.0393	0.454246	24.0	NA
back to the top

			Experiment Mouse 1.OST Liver (Affymetrix) UCSC RNAseq RNAseq_NM_001033286 Probeset 10352548 Links Wikipedia HomoloGene Symbol Slc30a10 Unigene Mm.227117 RefSeq Protein None RefSeq DNA NM_001033286 Description solute carrier family 30, member 10
	p-Value	q-Value	period	phase
JTK	2.48458e-10	7.3618e-07	24.0	23.0
Lomb Scargle	0.00055	0.173327	23.064	21.97
DeLichtenberg	0.2025	1.0	24.0	NA
back to the top

			Experiment Mouse 1.OST Liver (Affymetrix) UCSC RNAseq RNAseq_NM_080795 Probeset 10535759 Links Wikipedia HomoloGene Symbol Lnx2 Unigene Mm.272203 RefSeq Protein None RefSeq DNA NM_080795 Description ligand of numb-protein X 2
	p-Value	q-Value	period	phase
JTK	2.48458e-10	7.3618e-07	24.0	21.0
Lomb Scargle	0.000485	0.173327	23.064	21.81
DeLichtenberg	0.9025	1.0	24.0	NA
back to the top

			Experiment Mouse Pituitary 48 hour Hughes 2009 (Affymetrix) Probeset 1441258_at Links Wikipedia HomoloGene Symbol AF529169 Unigene Mm.458520 RefSeq Protein NP_705729 RefSeq DNA NM_153509 Description cDNA sequence AF529169
	p-Value	q-Value	period	phase
JTK	5.45e-10	7.92e-07	25.0	13.0
Lomb Scargle	0.00168	0.321058	24.383	18.72
DeLichtenberg	0.241	1.0	24.0	NA
back to the top

			Experiment Mouse Pituitary 48 hour Hughes 2009 (Affymetrix) Probeset 1434151_at Links Wikipedia HomoloGene Symbol Mettl7a1 Unigene Mm.220975 RefSeq Protein NP_081610 RefSeq DNA NM_027334 Description methyltransferase like 7A1
	p-Value	q-Value	period	phase
JTK	5.94e-10	8.11e-07	23.0	15.0
Lomb Scargle	1.24e-05	0.0159786	23.118	21.46
DeLichtenberg	0.2095	1.0	24.0	NA
back to the top

			Experiment Mouse Pituitary 48 hour Hughes 2009 (Affymetrix) Probeset 1434862_at Links Wikipedia HomoloGene Symbol Fut2 Unigene Mm.290046 RefSeq Protein NP_061364 RefSeq DNA NM_018876 Description fucosyltransferase 2
	p-Value	q-Value	period	phase
JTK	5.94e-10	8.11e-07	23.5	0.0
Lomb Scargle	1.57e-05	0.0186338	23.946	6.36
DeLichtenberg	0.1043	0.641401	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_145575 Probeset 1424769_s_at Links Wikipedia HomoloGene Symbol Cald1 Unigene Mm.308134 RefSeq Protein NP_663550 RefSeq DNA NM_145575 Description caldesmon 1
	p-Value	q-Value	period	phase
JTK	1.1e-08	8.32e-07	24.0	4.0
Lomb Scargle	6.3e-07	0.000195956	23.946	11.08
DeLichtenberg	0.6674	1.0	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001177552 RNAseq_NM_025976 Probeset 1426490_at Links Wikipedia HomoloGene Symbol Bfar Unigene Mm.223689 RefSeq Protein NP_001171023 NP_080252 RefSeq DNA NM_001177552 NM_025976 Description bifunctional apoptosis regulator
	p-Value	q-Value	period	phase
JTK	1.1e-08	8.32e-07	25.0	8.0
Lomb Scargle	3.51e-06	0.000515024	23.525	15.99
DeLichtenberg	0.462	1.0	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_010424 Probeset 1450702_at Links Wikipedia HomoloGene Symbol Hfe Unigene Mm.2681 RefSeq Protein NP_034554 RefSeq DNA NM_010424 Description hemochromatosis
	p-Value	q-Value	period	phase
JTK	1.1e-08	8.32e-07	24.0	21.5
Lomb Scargle	2.73e-05	0.00171963	23.946	5.11
DeLichtenberg	0.081	0.681436	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_011274 Probeset 1433913_at Links Wikipedia HomoloGene Symbol C80913 Unigene Mm.387220 RefSeq Protein NP_035404 RefSeq DNA NM_011274 Description expressed sequence C80913
	p-Value	q-Value	period	phase
JTK	1.1e-08	8.32e-07	25.0	9.5
Lomb Scargle	2.53e-05	0.0016537	24.836	17.24
DeLichtenberg	0.8424	1.0	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_011673 Probeset 1435133_at Links Wikipedia HomoloGene Symbol Ugcg Unigene Mm.198803 RefSeq Protein NP_035803 RefSeq DNA NM_011673 Description UDP-glucose ceramide glucosyltransferase
	p-Value	q-Value	period	phase
JTK	1.1e-08	8.32e-07	22.0	9.5
Lomb Scargle	1.28e-05	0.00110434	22.345	15.93
DeLichtenberg	0.051	0.587175	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001033600 RNAseq_NM_019477 RNAseq_NM_207625 Probeset 1451828_a_at Links Wikipedia HomoloGene Symbol Acsl4 Unigene Mm.391337 RefSeq Protein NP_001028772 NP_062350 NP_997508 RefSeq DNA NM_001033600 NM_019477 NM_207625 Description acyl-CoA synthetase long-chain family member 4
	p-Value	q-Value	period	phase
JTK	1.1e-08	8.32e-07	26.0	19.5
Lomb Scargle	1.19e-05	0.0010565	26.302	1.34
DeLichtenberg	0.0364	0.568452	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001042674 RNAseq_NM_001042675 RNAseq_NM_019733 Probeset 1455936_a_at Links Wikipedia HomoloGene Symbol Rbpms Unigene Mm.323997 RefSeq Protein NP_001036139 NP_001036140 NP_062707 RefSeq DNA NM_001042674 NM_001042675 NM_019733 Description RNA binding protein gene with multiple splicing
	p-Value	q-Value	period	phase
JTK	1.1e-08	8.32e-07	24.0	2.0
Lomb Scargle	3.78e-05	0.00212042	24.836	6.81
DeLichtenberg	0.0235	0.568452	24.0	NA
back to the top

			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_178337 Probeset 1428282_at Links Wikipedia HomoloGene Symbol Tbce Unigene Mm.260209 RefSeq Protein NP_848027 RefSeq DNA NM_178337 Description tubulin-specific chaperone E
	p-Value	q-Value	period	phase
JTK	1.1e-08	8.32e-07	26.0	4.0
Lomb Scargle	3.56e-05	0.00205057	25.306	12.55
DeLichtenberg	0.2461	1.0	24.0	NA
back to the top