CIRCA: Circadian gene expression profiles.

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(Examples 1451371_at 1422470_at gnf1m00037_a_at or Arntl or kinase inhibitor )

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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_021472 RNAseq_NM_201239 Probeset 1422603_at Links Wikipedia HomoloGene Symbol Rnase4 Unigene Mm.478353 RefSeq Protein NP_067447 NP_957691 RefSeq DNA NM_021472 NM_201239 Description ribonuclease, RNase A family 4
	p-Value	q-Value	period	phase
JTK	7.64e-11	1.15e-08	26.0	11.25
Lomb Scargle	1.09e-06	0.0002653	25.306	18.08
DeLichtenberg	0.5333	1.0	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_030561 Probeset 1416609_at Links Wikipedia HomoloGene Symbol BC004004 Unigene Mm.290116 RefSeq Protein NP_085038 RefSeq DNA NM_030561 Description cDNA sequence BC004004
	p-Value	q-Value	period	phase
JTK	7.64e-11	1.15e-08	25.0	2.0
Lomb Scargle	1.16e-06	0.000269676	24.836	10.04
DeLichtenberg	0.2251	1.0	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001161798 RNAseq_NM_010840 RNAseq_NR_027809 Probeset 1434087_at Links Wikipedia HomoloGene Symbol Mthfr Unigene Mm.89959 RefSeq Protein NP_001155270 NP_034970 RefSeq DNA NM_001161798 NM_010840 NR_027809 Description 5,10-methylenetetrahydrofolate reductase
	p-Value	q-Value	period	phase
JTK	7.64e-11	1.15e-08	24.5	22.5
Lomb Scargle	1.95e-06	0.000369525	24.383	5.95
DeLichtenberg	0.0001	0.0437874	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_009516 Probeset 1416774_at Links Wikipedia HomoloGene Symbol Wee1 Unigene Mm.287173 RefSeq Protein NP_033542 RefSeq DNA NM_009516 Description WEE 1 homolog 1 (S. pombe)
	p-Value	q-Value	period	phase
JTK	7.64e-11	1.15e-08	24.0	14.0
Lomb Scargle	5.1e-06	0.000625041	23.525	19.2
DeLichtenberg	0.001	0.249177	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_026272 Probeset 1451678_at Links Wikipedia HomoloGene Symbol Narf Unigene Mm.291832 RefSeq Protein NP_080548 RefSeq DNA NM_026272 Description nuclear prelamin A recognition factor
	p-Value	q-Value	period	phase
JTK	7.64e-11	1.15e-08	23.0	11.0
Lomb Scargle	5.44e-06	0.000654265	23.525	17.92
DeLichtenberg	0.0324	0.568452	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_145925 Probeset 1437342_x_at Links Wikipedia HomoloGene Symbol Pttg1ip Unigene Mm.28853 RefSeq Protein NP_666037 RefSeq DNA NM_145925 Description pituitary tumor-transforming 1 interacting protein
	p-Value	q-Value	period	phase
JTK	7.64e-11	1.15e-08	23.0	4.5
Lomb Scargle	3.58e-05	0.00205422	23.946	10.21
DeLichtenberg	0.1336	0.85278	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_009834 Probeset 1425837_a_at Links Wikipedia HomoloGene Symbol Ccrn4l Unigene Mm.86541 RefSeq Protein NP_033964 RefSeq DNA NM_009834 Description CCR4 carbon catabolite repression 4-like (S. cerevisiae)
	p-Value	q-Value	period	phase
JTK	7.64e-11	1.15e-08	23.0	13.5
Lomb Scargle	6.97e-05	0.00324541	22.725	18.89
DeLichtenberg	0.0	0.0	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_XM_001477842 Probeset 1431214_at Links Wikipedia HomoloGene Symbol Gm3579 Unigene None RefSeq Protein XP_001477892 RefSeq DNA XM_001477842 Description predicted gene 3579
	p-Value	q-Value	period	phase
JTK	7.64e-11	1.15e-08	25.0	16.5
Lomb Scargle	0.00351	0.0505927	26.829	22.62
DeLichtenberg	0.0058	0.568452	24.0	NA
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			Experiment Mouse Pituitary 48 hour Hughes 2009 (Affymetrix) Probeset 1435188_at Links Wikipedia HomoloGene Symbol Gm129 Unigene Mm.331218 RefSeq Protein NP_001028474 RefSeq DNA NM_001033302 Description predicted gene 129
	p-Value	q-Value	period	phase
JTK	3.35e-12	1.16e-08	24.0	11.5
Lomb Scargle	0.000792	0.201952	23.118	17.86
DeLichtenberg	0.0	0.0	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_011281 Probeset 1425793_a_at Links Wikipedia HomoloGene Symbol Rorc Unigene Mm.4372 RefSeq Protein NP_035411 RefSeq DNA NM_011281 Description RAR-related orphan receptor gamma
	p-Value	q-Value	period	phase
JTK	8.45e-11	1.27e-08	25.0	6.25
Lomb Scargle	6.26e-05	0.00301637	25.306	0.32
DeLichtenberg	0.0476	0.58548	24.0	NA
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			Experiment Mouse 1.OST Adrenal Gland (Affymetrix) UCSC RNAseq RNAseq_NM_018881 Probeset 10359582 Links Wikipedia HomoloGene Symbol Fmo2 Unigene Mm.10929 RefSeq Protein None RefSeq DNA NM_018881 Description flavin containing monooxygenase 2
	p-Value	q-Value	period	phase
JTK	3.6838e-13	1.30981e-08	24.0	17.0
Lomb Scargle	0.000336	1.0	23.892	16.03
DeLichtenberg	0.8853	1.0	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001077364 RNAseq_NM_010286 Probeset 1425281_a_at Links Wikipedia HomoloGene Symbol Tsc22d3 Unigene Mm.22216 RefSeq Protein NP_001070832 NP_034416 RefSeq DNA NM_001077364 NM_010286 Description TSC22 domain family, member 3
	p-Value	q-Value	period	phase
JTK	9.25e-11	1.37e-08	25.0	17.75
Lomb Scargle	9.4e-07	0.000244167	24.836	23.92
DeLichtenberg	0.0075	0.568452	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_145384 Probeset 1425632_a_at Links Wikipedia HomoloGene Symbol Pqlc2 Unigene Mm.45131 RefSeq Protein NP_663359 RefSeq DNA NM_145384 Description PQ loop repeat containing 2
	p-Value	q-Value	period	phase
JTK	9.25e-11	1.37e-08	22.0	6.5
Lomb Scargle	1.13e-05	0.00102133	22.345	10.98
DeLichtenberg	0.0946	0.718517	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_175093 Probeset 1426065_a_at Links Wikipedia HomoloGene Symbol Trib3 Unigene Mm.276018 RefSeq Protein NP_780302 RefSeq DNA NM_175093 Description tribbles homolog 3 (Drosophila)
	p-Value	q-Value	period	phase
JTK	9.25e-11	1.37e-08	23.6667	7.5
Lomb Scargle	0.000125	0.00481026	21.978	15.53
DeLichtenberg	0.001	0.249177	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_172679 Probeset 1458401_at Links Wikipedia HomoloGene Symbol 4932438A13Rik Unigene Mm.207907 RefSeq Protein NP_766267 RefSeq DNA NM_172679 Description RIKEN cDNA 4932438A13 gene
	p-Value	q-Value	period	phase
JTK	9.25e-11	1.37e-08	27.0	20.0
Lomb Scargle	9.96e-05	0.00413633	26.829	6.11
DeLichtenberg	0.0231	0.568452	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_019971 Probeset 1419123_a_at Links Wikipedia HomoloGene Symbol Pdgfc Unigene Mm.331089 RefSeq Protein NP_064355 RefSeq DNA NM_019971 Description platelet-derived growth factor, C polypeptide
	p-Value	q-Value	period	phase
JTK	1.02e-10	1.51e-08	24.0	0.5
Lomb Scargle	7.52e-07	0.000211975	24.383	6.5
DeLichtenberg	0.0223	0.568452	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001163704 RNAseq_NM_001163705 RNAseq_NM_001163706 RNAseq_NM_001163707 RNAseq_NM_015797 Probeset 1417501_at Links Wikipedia HomoloGene Symbol Fbxo6 Unigene Mm.27445 RefSeq Protein NP_001157176 NP_001157177 NP_001157178 NP_001157179 NP_056612 RefSeq DNA NM_001163704 NM_001163705 NM_001163706 NM_001163707 NM_015797 Description F-box protein 6
	p-Value	q-Value	period	phase
JTK	1.12e-10	1.63e-08	26.0	0.75
Lomb Scargle	1.17e-06	0.000270606	25.306	8.97
DeLichtenberg	0.0532	0.592292	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001141931 RNAseq_NM_001141932 RNAseq_NM_020296 Probeset 1418703_at Links Wikipedia HomoloGene Symbol Rbms1 Unigene Mm.259667 RefSeq Protein NP_001135403 NP_001135404 NP_064692 RefSeq DNA NM_001141931 NM_001141932 NM_020296 Description RNA binding motif, single stranded interacting protein 1
	p-Value	q-Value	period	phase
JTK	1.12e-10	1.63e-08	22.0	8.0
Lomb Scargle	1.25e-06	0.000277716	22.725	13.99
DeLichtenberg	0.0473	0.58548	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001136260 RNAseq_NM_001197147 RNAseq_NM_018760 Probeset 1426432_a_at Links Wikipedia HomoloGene Symbol Slc4a4 Unigene Mm.41044 RefSeq Protein NP_001129732 NP_001184076 NP_061230 RefSeq DNA NM_001136260 NM_001197147 NM_018760 Description solute carrier family 4 (anion exchanger), member 4
	p-Value	q-Value	period	phase
JTK	1.12e-10	1.63e-08	24.0	5.0
Lomb Scargle	7.24e-06	0.000770121	24.383	12.12
DeLichtenberg	0.0151	0.568452	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_020567 Probeset 1417506_at Links Wikipedia HomoloGene Symbol Gmnn Unigene Mm.12239 RefSeq Protein NP_065592 RefSeq DNA NM_020567 Description geminin
	p-Value	q-Value	period	phase
JTK	1.12e-10	1.63e-08	23.0	11.5
Lomb Scargle	9.09e-06	0.000877876	23.118	18.02
DeLichtenberg	0.0942	0.718086	24.0	NA
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