CIRCA: Circadian gene expression profiles.

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(Examples 1451371_at 1422470_at gnf1m00037_a_at or Arntl or kinase inhibitor )

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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001146707 RNAseq_NM_015781 Probeset 1420478_at Links Wikipedia HomoloGene Symbol Nap1l1 Unigene Mm.290407 RefSeq Protein NP_001140179 NP_056596 RefSeq DNA NM_001146707 NM_015781 Description nucleosome assembly protein 1-like 1
	p-Value	q-Value	period	phase
JTK	4.57e-12	9.77e-10	25.0	19.0
Lomb Scargle	1.47e-06	0.000302733	24.383	2.0
DeLichtenberg	0.618	1.0	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_011873 Probeset 1415796_at Links Wikipedia HomoloGene Symbol Dazap2 Unigene Mm.476736 RefSeq Protein NP_036003 RefSeq DNA NM_011873 Description DAZ associated protein 2
	p-Value	q-Value	period	phase
JTK	4.57e-12	9.77e-10	24.0	5.0
Lomb Scargle	1.98e-06	0.000372083	23.525	11.31
DeLichtenberg	0.7782	1.0	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_026784 RNAseq_NM_027348 Probeset 1427893_a_at Links Wikipedia HomoloGene Symbol Pmvk Unigene Mm.34242 RefSeq Protein NP_081060 NP_081624 RefSeq DNA NM_026784 NM_027348 Description phosphomevalonate kinase
	p-Value	q-Value	period	phase
JTK	4.57e-12	9.77e-10	26.0	19.75
Lomb Scargle	1.2e-06	0.000270606	25.306	5.09
DeLichtenberg	0.0198	0.568452	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_010295 Probeset 1455959_s_at Links Wikipedia HomoloGene Symbol Gclc Unigene Mm.89888 RefSeq Protein NP_034425 RefSeq DNA NM_010295 Description glutamate-cysteine ligase, catalytic subunit
	p-Value	q-Value	period	phase
JTK	4.57e-12	9.77e-10	25.0	2.5
Lomb Scargle	2.26e-06	0.000398157	24.836	10.52
DeLichtenberg	0.0539	0.593896	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_008681 Probeset 1423413_at Links Wikipedia HomoloGene Symbol Ndrg1 Unigene Mm.30837 RefSeq Protein NP_032707 RefSeq DNA NM_008681 Description N-myc downstream regulated gene 1
	p-Value	q-Value	period	phase
JTK	4.57e-12	9.77e-10	26.0	1.5
Lomb Scargle	3.62e-06	0.000521615	24.383	9.51
DeLichtenberg	0.0014	0.295053	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_173767 Probeset 1453259_at Links Wikipedia HomoloGene Symbol Insc Unigene Mm.83037 RefSeq Protein NP_776128 RefSeq DNA NM_173767 Description inscuteable homolog (Drosophila)
	p-Value	q-Value	period	phase
JTK	4.57e-12	9.77e-10	26.0	19.5
Lomb Scargle	2.75e-06	0.000444544	24.836	5.35
DeLichtenberg	0.0127	0.568452	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_013548 RNAseq_NM_013550 RNAseq_NM_054045 RNAseq_NM_145073 RNAseq_NM_175653 RNAseq_NM_178203 RNAseq_NM_178204 RNAseq_NM_178205 RNAseq_NM_178206 RNAseq_NM_178207 RNAseq_NM_178215 RNAseq_NM_178216 Probeset 1460314_s_at Links Wikipedia HomoloGene Symbol Hist1h3a Hist1h3b Hist1h3c Hist1h3d Hist1h3e Hist1h3f Hist1h3g Hist1h3h Hist1h3i Hist2h3b Hist2h3c1 Hist2h3c2-ps Unigene Mm.342457 RefSeq Protein NP_038576 NP_038578 NP_473386 NP_659539 NP_783584 NP_835510 NP_835511 NP_835512 NP_835513 NP_835514 NP_835587 NP_835734 RefSeq DNA NM_013548 NM_013550 NM_054045 NM_145073 NM_175653 NM_178203 NM_178204 NM_178205 NM_178206 NM_178207 NM_178215 NM_178216 Description histone cluster 1, H3a /// histone cluster 1, H3b /// histone cluster 1, H3c /// histone cluster 1, H3d /// histone cluster 1, H3e /// histone cluster 1, H3f /// histone cluster 1, H3g /// histone cluster 1, H3h /// histone cluster 1, H3i /// histone cluster 2, H3b /// histone cluster 2, H3c1 /// histone cluster 2, H3c2, pseudogene
	p-Value	q-Value	period	phase
JTK	4.57e-12	9.77e-10	26.0	18.25
Lomb Scargle	1.76e-05	0.00131857	26.302	0.78
DeLichtenberg	0.0002	0.0798248	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_025994 Probeset 1431339_a_at Links Wikipedia HomoloGene Symbol Efhd2 Unigene Mm.395598 RefSeq Protein NP_080270 RefSeq DNA NM_025994 Description EF hand domain containing 2
	p-Value	q-Value	period	phase
JTK	5.1e-12	1.09e-09	23.0	13.0
Lomb Scargle	3.17e-06	0.000481381	22.345	18.9
DeLichtenberg	0.0212	0.568452	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001190448 RNAseq_NM_016672 Probeset 1426215_at Links Wikipedia HomoloGene Symbol Ddc Unigene Mm.12906 RefSeq Protein NP_001177377 NP_057881 RefSeq DNA NM_001190448 NM_016672 Description dopa decarboxylase
	p-Value	q-Value	period	phase
JTK	5.64e-12	1.16e-09	24.0	23.0
Lomb Scargle	3.84e-07	0.000157443	23.946	6.07
DeLichtenberg	0.0073	0.568452	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_028975 RNAseq_NM_030108 Probeset 1452053_a_at Links Wikipedia HomoloGene Symbol Tmem33 Unigene Mm.23217 RefSeq Protein NP_083251 NP_084384 RefSeq DNA NM_028975 NM_030108 Description transmembrane protein 33
	p-Value	q-Value	period	phase
JTK	5.64e-12	1.16e-09	24.0	19.75
Lomb Scargle	4.01e-07	0.000159436	23.525	2.86
DeLichtenberg	0.2339	1.0	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_016719 Probeset 1417673_at Links Wikipedia HomoloGene Symbol Grb14 Unigene Mm.214554 RefSeq Protein NP_057928 RefSeq DNA NM_016719 Description growth factor receptor bound protein 14
	p-Value	q-Value	period	phase
JTK	5.64e-12	1.16e-09	24.0	5.0
Lomb Scargle	9.02e-07	0.000240717	23.946	12.12
DeLichtenberg	0.1002	0.736973	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_016851 Probeset 1418301_at Links Wikipedia HomoloGene Symbol Irf6 Unigene Mm.273695 RefSeq Protein NP_058547 RefSeq DNA NM_016851 Description interferon regulatory factor 6
	p-Value	q-Value	period	phase
JTK	5.64e-12	1.16e-09	25.0	0.0
Lomb Scargle	1.19e-06	0.000270606	24.383	6.54
DeLichtenberg	0.0421	0.578713	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_146251 Probeset 1451361_a_at Links Wikipedia HomoloGene Symbol Pnpla7 Unigene Mm.389243 RefSeq Protein NP_666363 RefSeq DNA NM_146251 Description patatin-like phospholipase domain containing 7
	p-Value	q-Value	period	phase
JTK	5.64e-12	1.16e-09	24.0	2.5
Lomb Scargle	2.99e-06	0.000463366	23.946	9.3
DeLichtenberg	0.1055	0.754894	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001034962 RNAseq_NM_001034963 RNAseq_NM_001034964 RNAseq_NM_009166 RNAseq_NM_178362 Probeset 1428471_at Links Wikipedia HomoloGene Symbol Sorbs1 Unigene Mm.210815 RefSeq Protein NP_001030134 NP_001030135 NP_001030136 NP_033192 NP_848139 RefSeq DNA NM_001034962 NM_001034963 NM_001034964 NM_009166 NM_178362 Description sorbin and SH3 domain containing 1
	p-Value	q-Value	period	phase
JTK	5.64e-12	1.16e-09	23.0	8.0
Lomb Scargle	3.05e-06	0.000469481	22.725	15.18
DeLichtenberg	0.048	0.58548	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_016808 RNAseq_NM_198091 RNAseq_NM_198092 Probeset 1417168_a_at Links Wikipedia HomoloGene Symbol Usp2 Unigene Mm.272770 RefSeq Protein NP_058088 NP_932759 NP_932760 RefSeq DNA NM_016808 NM_198091 NM_198092 Description ubiquitin specific peptidase 2
	p-Value	q-Value	period	phase
JTK	5.64e-12	1.16e-09	22.0	13.0
Lomb Scargle	9.15e-06	0.00087803	22.345	18.48
DeLichtenberg	0.0	0.0	24.0	NA
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			Experiment Mouse NIH 3T3 Immortilized Cell Line 48 hour Hughes 2009 (Affymetrix) Probeset 1421087_at Links Wikipedia HomoloGene Symbol Per3 Unigene Mm.121361 RefSeq Protein NP_035197 RefSeq DNA NM_011067 Description period homolog 3 (Drosophila)
	p-Value	q-Value	period	phase
JTK	5.15e-14	1.16e-09	23.0	1.5
Lomb Scargle	5.85e-07	0.0087947	23.118	6.0
DeLichtenberg	0.0041	0.162885	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_026375 Probeset 1424712_at Links Wikipedia HomoloGene Symbol Ahctf1 Unigene Mm.128165 RefSeq Protein NP_080651 RefSeq DNA NM_026375 Description AT hook containing transcription factor 1
	p-Value	q-Value	period	phase
JTK	6.94e-12	1.4e-09	24.0	21.0
Lomb Scargle	8.67e-07	0.000235438	24.383	5.01
DeLichtenberg	0.2	1.0	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001122768 RNAseq_NM_178701 Probeset 1433505_a_at Links Wikipedia HomoloGene Symbol Lrrc8d Unigene Mm.23837 RefSeq Protein NP_001116240 NP_848816 RefSeq DNA NM_001122768 NM_178701 Description leucine rich repeat containing 8D
	p-Value	q-Value	period	phase
JTK	6.94e-12	1.4e-09	25.0	2.0
Lomb Scargle	4.39e-06	0.000578184	24.836	9.24
DeLichtenberg	0.0969	0.726469	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_026272 Probeset 1425344_at Links Wikipedia HomoloGene Symbol Narf Unigene Mm.291832 RefSeq Protein NP_080548 RefSeq DNA NM_026272 Description nuclear prelamin A recognition factor
	p-Value	q-Value	period	phase
JTK	6.94e-12	1.4e-09	22.0	11.75
Lomb Scargle	4.93e-06	0.000617633	22.345	17.95
DeLichtenberg	0.0127	0.568452	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_144884 Probeset 1426515_a_at Links Wikipedia HomoloGene Symbol Tor1a Unigene Mm.154994 RefSeq Protein NP_659133 RefSeq DNA NM_144884 Description torsin family 1, member A (torsin A)
	p-Value	q-Value	period	phase
JTK	6.94e-12	1.4e-09	23.0	14.0
Lomb Scargle	1.29e-05	0.00110434	23.118	21.45
DeLichtenberg	0.5988	1.0	24.0	NA
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